STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP55195.1acetyl-CoA decarbonylase/synthase delta subunit. (518 aa)    
Predicted Functional Partners:
SDP55240.1
acetyl-CoA decarbonylase/synthase beta subunit.
 
 0.999
SDP55258.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
 
 0.999
SDP55393.1
Protein of unknown function.
 
 0.997
SDP55665.1
Putative Fe-S cluster.
 
 0.997
SDP59383.1
Hypothetical protein.
 
 0.995
SDP55279.1
Methyltetrahydrofolate--corrinoid iron-sulfur protein Co-methyltransferase.
 
 
 0.981
SDP55218.1
Ni-dependent carbon monoxide dehydrogenase precursor.
  
 0.975
SDP55176.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
 
   0.968
SDP55335.1
Carbon-monoxide dehydrogenase catalytic subunit.
  
 0.949
SDO41257.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
 
   0.942
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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