STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP58633.14Fe-4S binding domain-containing protein. (362 aa)    
Predicted Functional Partners:
SDP13485.1
NADPH-dependent glutamate synthase beta chain.
 
 
 0.950
SDP57030.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
 
 
 0.899
SDO49806.1
Glutamate synthase (NADPH/NADH) small chain.
 
 
 0.877
SDP58594.1
Hydrogenase nickel incorporation protein HypB.
 
     0.814
hypA-2
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
     0.809
SDP49555.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
   
 0.806
SDP55530.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.800
SDP67751.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.769
SDO49842.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.708
SDP49535.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
  
 0.708
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.