STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP58793.1Glycolate oxidase. (466 aa)    
Predicted Functional Partners:
SDP58809.1
Glycolate oxidase iron-sulfur subunit.
 
 0.991
SDP07222.1
Glycolate oxidase iron-sulfur subunit.
 
 0.954
SDP60581.1
Glycolate oxidase iron-sulfur subunit.
 
 0.905
SDO54138.1
Fe-S oxidoreductase.
 
 0.883
SDP67751.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.865
SDP55135.1
Hypothetical protein.
  
  
  0.854
SDP73059.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
  
 0.824
SDP72974.1
L-lactate dehydrogenase complex protein LldE.
 
 0.807
SDP02508.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.794
SDP49535.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
   
 0.794
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.