STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP60340.1DNA-binding transcriptional regulator, GntR family. (206 aa)    
Predicted Functional Partners:
SDO34475.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SDO34619.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SDO55300.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SDP34094.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SDP39306.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SDP76752.1
Regulatory protein, gntR family.
 
  
 0.728
SDP30718.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
 
  
 0.665
SDP60359.1
Dimethylglycine oxidase; Belongs to the GcvT family.
  
    0.645
SDO56621.1
Transcriptional regulator, GntR family.
 
  
 0.619
SDO56926.1
Regulatory protein, gntR family.
 
  
 0.536
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.