STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (341 aa)    
Predicted Functional Partners:
SDP63296.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
  
    0.801
SDP63320.1
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB.
  
  
 0.800
SDO50508.1
tRNA 2-thiouridine synthesizing protein E.
   
 0.720
SDO62491.1
tRNA 2-thiouridine synthesizing protein E.
   
 0.720
SDP30304.1
tRNA 2-thiouridine synthesizing protein E.
   
 0.719
SDO35781.1
tRNA 2-thiouridine synthesizing protein E.
   
 0.718
SDP46479.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
    0.710
SDP42488.1
Uncharacterized protein.
    
 0.675
SDP25684.1
FMN adenylyltransferase; Belongs to the ribF family.
 
    0.652
trmD
tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
 
  
 0.601
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.