STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP65290.1Universal stress protein family protein. (293 aa)    
Predicted Functional Partners:
SDP67959.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.705
SDO66450.1
Hypothetical protein.
  
     0.661
SDO83908.1
Nitrate reductase gamma subunit.
  
   
 0.657
SDO65057.1
Rubrerythrin.
 
    0.619
SDO76427.1
Hypothetical protein.
  
    0.562
SDO91622.1
Transcriptional activator domain-containing protein.
  
     0.550
SDO56361.1
PEP-utilising enzyme, mobile domain.
 
   
 0.536
SDP57607.1
Ferredoxin.
  
     0.536
SDO35810.1
Hypothetical protein.
  
     0.533
SDO72796.1
Hypothetical protein.
 
    0.533
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.