STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP69637.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
SDP69601.1
Hypothetical protein.
       0.773
SDP69621.1
Phage portal protein, lambda family.
       0.773
SDP69654.1
Hypothetical protein.
      0.635
SDP69582.1
Hypothetical protein.
       0.495
SDP69665.1
Predicted phage recombinase, RecA/RadA family.
       0.447
SDP69681.1
Hypothetical protein.
       0.447
SDP69696.1
Prophage minor tail protein Z (GPZ).
       0.447
SDP69708.1
Hypothetical protein.
       0.447
SDP69722.1
Hypothetical protein.
       0.406
SDP69739.1
Hypothetical protein.
       0.406
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.