STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP71902.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (416 aa)    
Predicted Functional Partners:
SDO98401.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.994
SDP44274.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.994
SDO98435.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.993
SDP12558.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.993
SDO35113.1
Uncharacterized OB-fold protein, contains Zn-ribbon domain.
  
 0.863
SDO65802.1
Uncharacterized OB-fold protein, contains Zn-ribbon domain.
  
 0.859
SDP85986.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.844
SDO98799.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.834
SDP12316.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.834
SDP64780.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.762
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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