STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP77193.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
SDP77181.1
Hypothetical protein.
   
   0.914
SDP77203.1
Hypothetical protein.
       0.746
SDP75930.1
Phage major capsid protein, HK97 family.
   
 
 0.736
SDP77214.1
Hypothetical protein.
       0.689
SDO95962.1
Hypothetical protein.
   
   0.656
SDP77157.1
Hypothetical protein.
     
 0.636
SDO84945.1
Hypothetical protein.
   
   0.571
SDP24934.1
Hypothetical protein.
   
   0.571
SDP65163.1
Hypothetical protein.
   
   0.571
SDP83193.1
Hypothetical protein.
   
   0.571
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.