STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP78060.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
SDP78047.1
Hypothetical protein.
       0.773
SDP78073.1
Hypothetical protein.
       0.768
SDP78086.1
Hypothetical protein.
       0.768
SDP78102.1
Hypothetical protein.
       0.768
SDP78113.1
Phage major capsid protein E.
       0.756
SDP78130.1
Bacteriophage lambda head decoration protein D.
       0.745
SDP78144.1
Putative phage serine protease XkdF.
       0.745
SDP78033.1
Hypothetical protein.
       0.615
SDP78157.1
Phage portal protein.
       0.488
SDP78167.1
Hypothetical protein.
       0.488
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.