STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP78724.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (301 aa)    
Predicted Functional Partners:
SDP29287.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.767
SDP22820.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.749
SDP16654.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.735
SDO67533.1
Integron integrase.
  
   
 0.703
SDO66046.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.611
SDP72857.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.611
SDP67751.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.604
SDP78738.1
Hypothetical protein.
       0.536
SDP25914.1
DNA translocase FtsK.
 
   
 0.489
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
  
    0.468
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.