A0A0C3HZX7 protein (Oidiodendron maius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3HZX7

Uncharacterized protein; Belongs to the actin family. (751 aa)

Predicted Functional Partners:

A0A0C3D8V5

0.996

A0A0C3H2Z1

0.996

A0A0C3HC27

0.990

A0A0C3DAQ2

0.985

A0A0C3H5U1

0.980

A0A0C3DKU4

0.975

A0A0C3DUQ9

0.968

A0A0C3HKM4

0.961

A0A0C3GFF1

0.932

A0A0C3D7G1

0.910

Your Current Organism:

Oidiodendron maius

NCBI taxonomy Id: 913774
Other names: O. maius Zn, Oidiodendron maius Zn

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0C3D7G1	A0A0C3D8V5	HMG box domain-containing protein.	YL1_C domain-containing protein.	0.856
A0A0C3D7G1	A0A0C3DAQ2	HMG box domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.885
A0A0C3D7G1	A0A0C3DKU4	HMG box domain-containing protein.	PAPA-1 domain-containing protein.	0.699
A0A0C3D7G1	A0A0C3DUQ9	HMG box domain-containing protein.	Uncharacterized protein.	0.950
A0A0C3D7G1	A0A0C3GFF1	HMG box domain-containing protein.	Uncharacterized protein.	0.775
A0A0C3D7G1	A0A0C3H2Z1	HMG box domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.954
A0A0C3D7G1	A0A0C3H5U1	HMG box domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.954
A0A0C3D7G1	A0A0C3HC27	HMG box domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.971
A0A0C3D7G1	A0A0C3HKM4	HMG box domain-containing protein.	SET domain-containing protein.	0.661
A0A0C3D7G1	A0A0C3HZX7	HMG box domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.910
A0A0C3D8V5	A0A0C3D7G1	YL1_C domain-containing protein.	HMG box domain-containing protein.	0.856
A0A0C3D8V5	A0A0C3DAQ2	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.974
A0A0C3D8V5	A0A0C3DKU4	YL1_C domain-containing protein.	PAPA-1 domain-containing protein.	0.970
A0A0C3D8V5	A0A0C3DUQ9	YL1_C domain-containing protein.	Uncharacterized protein.	0.972
A0A0C3D8V5	A0A0C3GFF1	YL1_C domain-containing protein.	Uncharacterized protein.	0.919
A0A0C3D8V5	A0A0C3H2Z1	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.993
A0A0C3D8V5	A0A0C3H5U1	YL1_C domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.968
A0A0C3D8V5	A0A0C3HC27	YL1_C domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.991
A0A0C3D8V5	A0A0C3HKM4	YL1_C domain-containing protein.	SET domain-containing protein.	0.879
A0A0C3D8V5	A0A0C3HZX7	YL1_C domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.996