STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCO7_07856Probable nitrogen metabolic regulation protein nmr. (471 aa)    
Predicted Functional Partners:
RCO7_09058
Probable nitrogen regulatory protein areA.
    
 
 0.901
RCO7_01692
Related to GATA factor SREP.
    
 
 0.822
RCO7_01169
GATA-type domain-containing protein.
    
 
 0.556
RCO7_06803
Related to SFH1 subunit of the RSC complex.
    
 
 0.556
RCO7_00180
Related to CLOCK-CONTROLLED PROTEIN 8 (Ccg-8).
    
 
 0.556
RCO7_09974
Related to zinc finger protein white collar 2 (Wc-2).
    
 
 0.556
RCO7_02950
Probable GATA type zinc finger protein Asd4.
    
 
 0.556
RCO7_03114
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
      
 0.547
RCO7_08616
Probable nitrite reductase.
      
 0.440
Your Current Organism:
Rhynchosporium commune
NCBI taxonomy Id: 914237
Other names: ETH ZT Myc2338, R. commune, RS02CH1B, RS99CH6-C1a, Rhynchosporium commune Zaffarano, McDonald and Linde 2010
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