STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCO7_08963Zn(2)-C6 fungal-type domain-containing protein. (803 aa)    
Predicted Functional Partners:
RCO7_06392
ATP-dependent RNA helicase SUB2.
   
 0.919
RCO7_10271
Related to nuclear matrix protein p84.
   
 0.908
RCO7_06880
Probable THO complex subunit 3.
    
 0.905
RCO7_06093
Related to conserved coiled/coiled coil protein.
   
 0.892
RCO7_06527
Uncharacterized protein.
   
 0.887
RCO7_05162
Related to cap binding protein 80 (Cbp80).
    
 0.832
RCO7_07250
Nuclear cap-binding protein subunit 2.
    
 0.826
RCO7_04480
Related to myb-related protein cdc5.
   
 
 0.803
RCO7_00907
Probable pre-mRNA splicing protein PRP2.
   
 0.796
RCO7_04103
But2 domain-containing protein.
   
 0.796
Your Current Organism:
Rhynchosporium commune
NCBI taxonomy Id: 914237
Other names: ETH ZT Myc2338, R. commune, RS02CH1B, RS99CH6-C1a, Rhynchosporium commune Zaffarano, McDonald and Linde 2010
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.