STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCO7_01610Probable DNA-directed RNA polymerase II chain Rpb7. (195 aa)    
Predicted Functional Partners:
RCO7_01111
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.999
RCO7_04745
Related to DNA-directed RNA polymerase II chain.
   
 0.999
RCO7_01326
Related to DNA-directed RNA polymerase small Zn-binding chain.
    
 0.999
RCO7_07732
Probable DNA-directed RNA polymerase I, II, III 18kD subunit.
   
 0.999
RCO7_05815
Related to DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.999
RCO7_04173
Probable DNA-directed RNA polymerase II chain RPB3.
   
 0.999
RCO7_03044
Probable DNA-directed RNA polymerases I.
   
 0.999
RCO7_06265
Related to DNA-directed RNA polymerase 13.3K chain.
   
 0.999
RCO7_05617
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.999
RCO7_09709
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.999
Your Current Organism:
Rhynchosporium commune
NCBI taxonomy Id: 914237
Other names: ETH ZT Myc2338, R. commune, RS02CH1B, RS99CH6-C1a, Rhynchosporium commune Zaffarano, McDonald and Linde 2010
Server load: low (24%) [HD]