Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX84054.1 | EDX84181.1 | S7335_1751 | S7335_1878 | Conserved domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | MltA N-terminal domain family; [M] COG2821 Membrane-bound lytic murein transglycosylase. | 0.443 |
EDX84181.1 | EDX84054.1 | S7335_1878 | S7335_1751 | MltA N-terminal domain family; [M] COG2821 Membrane-bound lytic murein transglycosylase. | Conserved domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.443 |
EDX84181.1 | EDX85096.1 | S7335_1878 | S7335_2795 | MltA N-terminal domain family; [M] COG2821 Membrane-bound lytic murein transglycosylase. | [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | 0.423 |
EDX84181.1 | EDX86036.1 | S7335_1878 | S7335_3739 | MltA N-terminal domain family; [M] COG2821 Membrane-bound lytic murein transglycosylase. | D-Ala-D-Ala carboxypeptidase 3 (S13) family; [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | 0.487 |
EDX85096.1 | EDX84181.1 | S7335_2795 | S7335_1878 | [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | MltA N-terminal domain family; [M] COG2821 Membrane-bound lytic murein transglycosylase. | 0.423 |
EDX85096.1 | EDX86036.1 | S7335_2795 | S7335_3739 | [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | D-Ala-D-Ala carboxypeptidase 3 (S13) family; [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | 0.936 |
EDX86036.1 | EDX84181.1 | S7335_3739 | S7335_1878 | D-Ala-D-Ala carboxypeptidase 3 (S13) family; [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | MltA N-terminal domain family; [M] COG2821 Membrane-bound lytic murein transglycosylase. | 0.487 |
EDX86036.1 | EDX85096.1 | S7335_3739 | S7335_2795 | D-Ala-D-Ala carboxypeptidase 3 (S13) family; [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | [M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | 0.936 |