STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX84346.1Acetyltransferase, GNAT family; [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (203 aa)    
Predicted Functional Partners:
EDX83911.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.815
S7335_421
[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
    
  0.815
EDX84786.1
Acetyltransferase, GNAT family; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
 
  0.762
EDX85755.1
[E] COG0069 Glutamate synthase domain 2.
   
 
 0.709
EDX86408.1
[E] COG0069 Glutamate synthase domain 2.
   
 
 0.709
EDX86329.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
    
 0.480
EDX82755.1
Phosphotransferase enzyme family, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
   0.442
EDX83677.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
    
 0.438
EDX84904.1
[E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
     
 0.428
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.412
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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