STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX84511.1[M] COG0860 N-acetylmuramoyl-L-alanine amidase. (639 aa)    
Predicted Functional Partners:
S7335_748
Phage lysozyme, putative; [T] COG3103 SH3 domain protein.
  
 
 0.802
EDX85354.1
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
  
  
 
0.777
EDX85512.1
Transglycosylase SLT domain protein; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
    
 0.770
EDX86915.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 0.660
EDX84734.1
Peptidase, S54 (rhomboid) family; [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
    
   0.644
EDX85390.1
Peptidase, S54 (rhomboid) family; [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
    
   0.644
EDX86058.1
Peptidase, S54 (rhomboid) family; [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
    
   0.644
EDX87388.1
Peptidase, S54 (rhomboid) family, putative; [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
    
   0.644
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.576
EDX83997.1
[M] COG3409 Putative peptidoglycan-binding domain-containing protein.
 
  
 0.504
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.