STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX85407.1Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase; overlaps another CDS with the same product name. (435 aa)    
Predicted Functional Partners:
EDX86972.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
 
     0.926
EDX86828.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase; overlaps another CDS with the same product name.
 
    
0.804
EDX84210.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.718
EDX86587.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
  
     0.665
EDX87207.1
Nucleotidyl transferase family; [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 0.633
EDX87622.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
  
     0.607
EDX85329.1
Malto-oligosyltrehalose trehalohydrolase; [G] COG0296 1,4-alpha-glucan branching enzyme.
   
  0.603
EDX86114.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0296 1,4-alpha-glucan branching enzyme.
   
  0.603
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.603
EDX86091.1
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.572
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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