STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX85437.1Amylo-alpha-1,6-glucosidase family; [G] COG3408 Glycogen debranching enzyme. (742 aa)    
Predicted Functional Partners:
EDX84337.1
Phosphoglucomutase/phosphomannomutase, C-terminal domain family; [G] COG0033 Phosphoglucomutase.
   
 
 0.769
EDX83656.1
Alpha-glucan phosphorylases subfamily; [G] COG0058 Glucan phosphorylase.
 
 0.750
S7335_442
Glycogen/starch/alpha-glucan phosphorylases subfamily; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.713
EDX86995.1
Glycogen/starch/alpha-glucan phosphorylases subfamily; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.713
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.615
EDX85329.1
Malto-oligosyltrehalose trehalohydrolase; [G] COG0296 1,4-alpha-glucan branching enzyme.
  
 
 0.568
EDX86114.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0296 1,4-alpha-glucan branching enzyme.
 
 
 0.568
EDX84740.1
Hypothetical protein; [G] COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases.
    
 0.556
EDX86953.1
[G] COG3280 Maltooligosyl trehalose synthase.
     
 0.529
EDX84660.1
Protein-glutamate methylesterase CheB; [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
       0.474
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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