STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX85480.1ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. (337 aa)    
Predicted Functional Partners:
EDX84540.1
ABC-2 type transporter superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.945
EDX86734.1
Hypothetical protein; [R] COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
 0.807
EDX87098.1
ABC-2 type transporter superfamily; [R] COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
 0.807
S7335_310
ABC transporter, ATP-binding protein; [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
    
 
0.770
S7335_865
ABC-2 type transporter superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.767
S7335_496
ABC-2 type transporter family; [V] COG0842 ABC-type multidrug transport system, permease component.
 
 
 
  0.672
S7335_149
ABC-2 type transporter family; [V] COG0842 ABC-type multidrug transport system, permease component.
 
 
 
  0.606
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.538
atpD-2
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.538
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.534
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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