STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
S7335_320[Q] COG2124 Cytochrome P450. (452 aa)    
Predicted Functional Partners:
EDX86329.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
 
 0.985
EDX86939.1
Amino acid adenylation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.968
EDX86159.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
 
 0.954
EDX83677.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
 
 0.945
S7335_347
Helicase conserved C-terminal domain protein; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
    
 0.831
EDX86043.1
Helicase conserved C-terminal domain protein; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
    
 0.831
polA
DNA polymerase I superfamily; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.829
EDX83995.1
PAP2 superfamily protein; [I] COG0671 Membrane-associated phospholipid phosphatase.
   
  0.723
EDX84332.1
[R] COG0666 FOG: Ankyrin repeat.
    
 0.695
rplF
Ribosomal protein L6, putative; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.674
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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