STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7335_36ABC transporter, ATP-binding protein, putative; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (236 aa)    
Predicted Functional Partners:
EDX85687.1
Efflux ABC transporter, permease protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.982
S7335_155
DevC protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.962
S7335_97
Efflux ABC transporter, permease protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 0.959
EDX86376.1
Auxiliary transport protein, MFP family; [M] COG0845 Membrane-fusion protein.
  
 
 0.926
EDX84512.1
DevC protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.918
S7335_63
DevC protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.917
EDX86200.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 
0.874
S7335_382
ABC exporter membrane fusion protein, DevB family; [M] COG0845 Membrane-fusion protein.
 
   0.767
EDX87054.1
ABC transporter, permease protein, putative; [E] COG0765 ABC-type amino acid transport system, permease component.
 
  
 0.694
S7335_149
ABC-2 type transporter family; [V] COG0842 ABC-type multidrug transport system, permease component.
 
    
 0.643
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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