STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX86000.1Bacterial transferase hexapeptide repeat protein; [R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (187 aa)    
Predicted Functional Partners:
EDX83706.1
Carbonic anhydrase domain protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.920
cbbL
Ribulose bisphosphate carboxylase large chain, catalytic domain subfamily, putative; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
 
 0.869
EDX84881.1
[C] COG4451 Ribulose bisphosphate carboxylase small subunit.
    
 
 0.580
EDX85223.1
[C] COG4451 Ribulose bisphosphate carboxylase small subunit.
    
 
 0.580
EDX86709.1
[C] COG4451 Ribulose bisphosphate carboxylase small subunit.
    
 
 0.580
S7335_45
[C] COG4451 Ribulose bisphosphate carboxylase small subunit.
    
 
 0.580
EDX86551.1
Conserved hypothetical protein TIGR02652; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.577
EDX87478.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.492
EDX87875.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.468
EDX85333.1
[M] COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
  0.434
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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