STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7335_375Hypothetical protein; [T] COG5635 Predicted NTPase (NACHT family); WD domain, G-beta repeat. (1181 aa)    
Predicted Functional Partners:
S7335_347
Helicase conserved C-terminal domain protein; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
 
 
 0.911
EDX86043.1
Helicase conserved C-terminal domain protein; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
   
 0.900
EDX86779.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
 
 
  0.852
S7335_60
Helicase conserved C-terminal domain protein; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
  
  0.831
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
 0.812
EDX83868.1
Hypothetical protein; [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
    
  0.743
EDX85080.1
Metallo-beta-lactamase superfamily protein; [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
    
  0.743
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
  0.730
EDX84332.1
[R] COG0666 FOG: Ankyrin repeat.
    
 0.724
EDX85822.1
Hypothetical protein; [KL] COG1199 Rad3-related DNA helicases.
  
 
  0.668
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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