Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX85405.1 | EDX86090.1 | S7335_3106 | S7335_3793 | Sulfotransferase domain superfamily; Overlaps another CDS with the same product name. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.464 |
EDX85405.1 | S7335_542 | S7335_3106 | S7335_542 | Sulfotransferase domain superfamily; Overlaps another CDS with the same product name. | Hypothetical protein. | 0.770 |
EDX86027.1 | EDX86090.1 | S7335_3730 | S7335_3793 | Sulfotransferase domain superfamily; [R] COG0457 FOG: TPR repeat. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.402 |
EDX86090.1 | EDX85405.1 | S7335_3793 | S7335_3106 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Sulfotransferase domain superfamily; Overlaps another CDS with the same product name. | 0.464 |
EDX86090.1 | EDX86027.1 | S7335_3793 | S7335_3730 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Sulfotransferase domain superfamily; [R] COG0457 FOG: TPR repeat. | 0.402 |
EDX86090.1 | EDX87652.1 | S7335_3793 | S7335_5362 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.432 |
EDX86090.1 | S7335_542 | S7335_3793 | S7335_542 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.599 |
EDX87652.1 | EDX86090.1 | S7335_5362 | S7335_3793 | Hypothetical protein. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.432 |
S7335_542 | EDX85405.1 | S7335_542 | S7335_3106 | Hypothetical protein. | Sulfotransferase domain superfamily; Overlaps another CDS with the same product name. | 0.770 |
S7335_542 | EDX86090.1 | S7335_542 | S7335_3793 | Hypothetical protein. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.599 |