STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX86171.1Hypothetical protein; [O] COG0760 Parvulin-like peptidyl-prolyl isomerase. (252 aa)    
Predicted Functional Partners:
EDX84217.1
Type I secretion system ATPase subfamily, putative; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
     0.859
EDX86376.1
Auxiliary transport protein, MFP family; [M] COG0845 Membrane-fusion protein.
 
   
 0.821
EDX86845.1
Hypothetical protein; [S] COG3937 Uncharacterized conserved protein.
  
     0.769
EDX83737.1
GtrA-like protein; [S] COG2246 Predicted membrane protein.
 
     0.719
EDX86280.1
Bacterial pre-peptidase C-terminal domain family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
   
 0.717
EDX84200.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.708
EDX87654.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.703
EDX85362.1
Transcriptional regulator, Crp/Fnr family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.694
EDX86767.1
[J] COG0291 Ribosomal protein L35.
  
     0.686
S7335_954
Filamentous haemagglutinin family N-terminal domain protein; [U] COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 
   0.682
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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