STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX86191.1Conserved hypothetical protein TIGR00268; [R] COG1606 ATP-utilizing enzymes of the PP-loop superfamily. (269 aa)    
Predicted Functional Partners:
EDX85472.1
Hypothetical protein; [R] COG1691 NCAIR mutase (PurE)-related proteins.
 
  
 0.968
EDX87617.1
[S] COG1641 Uncharacterized conserved protein; Belongs to the LarC family.
  
 0.927
EDX84838.1
CbiM; [P] COG0310 ABC-type Co2+ transport system, permease component.
  
    0.809
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
    0.650
EDX86583.1
Hypothetical protein.
       0.592
cbbL
Ribulose bisphosphate carboxylase large chain, catalytic domain subfamily, putative; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
  0.572
EDX87641.1
Cysteine-rich domain protein; [C] COG0247 Fe-S oxidoreductase.
 
   
  0.562
EDX84784.1
Oxidoreductase, aldo/keto reductase family; [N] COG1256 Flagellar hook-associated protein.
 
    0.458
EDX84025.1
Acetyltransferase, GNAT family; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.442
S7335_90
Hypothetical protein; [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases.
  
 
  0.434
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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