STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX86588.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (232 aa)    
Predicted Functional Partners:
EDX82528.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.884
EDX82533.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.884
S7335_968
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.884
EDX87879.1
Hypothetical protein.
    
 
 0.749
S7335_748
Phage lysozyme, putative; [T] COG3103 SH3 domain protein.
    
 
 0.749
S7335_946
Conserved domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
 
 0.749
EDX84306.1
Cyclic nucleotide-binding domain protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.679
EDX86303.1
Transcriptional regulator, PadR family, putative; [K] COG1695 Predicted transcriptional regulators.
  
     0.611
EDX85220.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.607
EDX82721.1
Hypothetical protein; [U] COG3505 Type IV secretory pathway, VirD4 components.
 
 
 
 0.587
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.