STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX86774.1TldD/PmbA family; [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs. (441 aa)    
Predicted Functional Partners:
EDX87811.1
TldD/PmbA family; [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
  
     0.774
EDX84504.1
Hypothetical protein.
       0.515
EDX84862.1
TldD/PmbA family; [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
  
     0.500
EDX85574.1
TldD/PmbA family; [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
  
     0.492
EDX85719.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.492
EDX87271.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L superfamily; [P] COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit.
       0.402
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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