Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX86964.1 | EDX87573.1 | S7335_4671 | S7335_5283 | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | Hypothetical protein; [R] COG0618 Exopolyphosphatase-related proteins. | 0.494 |
EDX86964.1 | EDX87678.1 | S7335_4671 | S7335_5388 | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.404 |
EDX86964.1 | S7335_113 | S7335_4671 | S7335_113 | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | [O] COG2020 Putative protein-S-isoprenylcysteine methyltransferase. | 0.403 |
EDX86964.1 | S7335_665 | S7335_4671 | S7335_665 | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | MerR, DNA binding family; [K] COG0789 Predicted transcriptional regulators. | 0.499 |
EDX86964.1 | murA | S7335_4671 | S7335_4324 | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.436 |
EDX87573.1 | EDX86964.1 | S7335_5283 | S7335_4671 | Hypothetical protein; [R] COG0618 Exopolyphosphatase-related proteins. | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | 0.494 |
EDX87573.1 | EDX87678.1 | S7335_5283 | S7335_5388 | Hypothetical protein; [R] COG0618 Exopolyphosphatase-related proteins. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.427 |
EDX87678.1 | EDX86964.1 | S7335_5388 | S7335_4671 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | 0.404 |
EDX87678.1 | EDX87573.1 | S7335_5388 | S7335_5283 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein; [R] COG0618 Exopolyphosphatase-related proteins. | 0.427 |
S7335_113 | EDX86964.1 | S7335_113 | S7335_4671 | [O] COG2020 Putative protein-S-isoprenylcysteine methyltransferase. | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | 0.403 |
S7335_665 | EDX86964.1 | S7335_665 | S7335_4671 | MerR, DNA binding family; [K] COG0789 Predicted transcriptional regulators. | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | 0.499 |
murA | EDX86964.1 | S7335_4324 | S7335_4671 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | Peptidase, M48 family; [O] COG0501 Zn-dependent protease with chaperone function. | 0.436 |