Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX83815.1 | EDX87059.1 | S7335_1512 | S7335_4766 | GtrA-like protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.419 |
EDX83815.1 | EDX87714.1 | S7335_1512 | S7335_5424 | GtrA-like protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis. | Hypothetical protein. | 0.419 |
EDX84171.1 | EDX87059.1 | S7335_1868 | S7335_4766 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.532 |
EDX84171.1 | EDX87714.1 | S7335_1868 | S7335_5424 | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | Hypothetical protein. | 0.532 |
EDX87059.1 | EDX83815.1 | S7335_4766 | S7335_1512 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | GtrA-like protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.419 |
EDX87059.1 | EDX84171.1 | S7335_4766 | S7335_1868 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.532 |
EDX87059.1 | EDX87714.1 | S7335_4766 | S7335_5424 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.773 |
EDX87714.1 | EDX83815.1 | S7335_5424 | S7335_1512 | Hypothetical protein. | GtrA-like protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.419 |
EDX87714.1 | EDX84171.1 | S7335_5424 | S7335_1868 | Hypothetical protein. | Helix-turn-helix domain protein; [K] COG1396 Predicted transcriptional regulators. | 0.532 |
EDX87714.1 | EDX87059.1 | S7335_5424 | S7335_4766 | Hypothetical protein. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.773 |