STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX87888.1ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG4250 Predicted sensor protein/domain. (707 aa)    
Predicted Functional Partners:
EDX85138.1
PAS fold family; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
0.984
EDX87533.1
[T] COG2198 FOG: HPt domain.
  
 0.892
EDX87397.1
PAS fold family; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
0.891
EDX84792.1
Response regulator receiver domain protein; [T] COG0642 Signal transduction histidine kinase.
 
0.888
EDX85695.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
0.888
EDX85722.1
Hpt domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 0.884
EDX86183.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
0.874
EDX84873.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
0.873
EDX86751.1
Hypothetical protein; [T] COG0642 Signal transduction histidine kinase; CHASE2 domain family.
 
 
0.869
EDX86398.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
0.856
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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