STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7335_712[R] COG0790 FOG: TPR repeat, SEL1 subfamily. (108 aa)    
Predicted Functional Partners:
EDX83701.1
Hypothetical protein; [O] COG0464 ATPases of the AAA+ class.
    
 0.641
S7335_176
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
    
 0.641
EDX86511.1
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
    
 0.641
EDX87206.1
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
    
 0.641
S7335_634
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
    
 0.641
S7335_682
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
    
 0.641
EDX85138.1
PAS fold family; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 0.567
EDX87533.1
[T] COG2198 FOG: HPt domain.
   
 0.537
EDX85722.1
Hpt domain protein; [T] COG0784 FOG: CheY-like receiver.
   
 0.519
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
    
   0.506
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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