STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S7335_873Hsp90 ATPase activator family protein, putative; [S] COG3832 Uncharacterized conserved protein. (184 aa)    
Predicted Functional Partners:
S7335_816
Transcriptional regulator, ArsR family protein; [K] COG0640 Predicted transcriptional regulators.
 
  
 0.923
S7335_810
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
       0.645
S7335_865
ABC-2 type transporter superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.435
S7335_543
Hypothetical protein; [T] COG0642 Signal transduction histidine kinase.
  
     0.424
EDX87200.1
Glyoxalase family protein; [E] COG0346 Lactoylglutathione lyase and related lyases.
  
     0.407
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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