STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_1176Protein DGCR14. (470 aa)    
Predicted Functional Partners:
AUD_1897
Pre-mRNA-processing factor 19.
    
 0.788
AUD_1757
Pre-mRNA-splicing factor syf1.
   
 0.785
AUD_1676
U2 small nuclear ribonucleoprotein A.
    
  0.745
AUD_3631
Pre-mRNA-processing protein 45.
    
 0.717
AUD_1141
116 kDa U5 small nuclear ribonucleoprotein component.
    
  0.714
AUD_7717
Pre-mRNA-splicing factor clf1.
     
 0.705
AUD_2529
Pre-mRNA-splicing factor syf2.
    
  0.701
AUD_2381
G-patch domain-containing protein C1486.03.
   
 0.695
AUD_1457
Pre-mRNA-splicing factor isy1.
    
 0.678
AUD_1072
Pre-mRNA-splicing factor brr2.
    
  0.662
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.