STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_4196BZIP domain-containing protein. (404 aa)    
Predicted Functional Partners:
AUD_8616
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.990
AUD_7965
60S ribosomal protein L5.
   
 
 0.987
AUD_4795
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.986
AUD_1160
60S ribosomal protein L25.
   
   0.985
AUD_5893
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.982
AUD_6044
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.977
AUD_7400
60S ribosomal protein L31.
   
 
 0.976
AUD_6467
60S ribosomal protein L32.
   
   0.975
AUD_4213
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.974
AUD_8702
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.974
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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