Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AUD_4196BZIP domain-containing protein. (404 aa)    
Predicted Functional Partners:
AUD_8616
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.972
AUD_7965
60S ribosomal protein L5.
   
   0.968
AUD_4795
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.966
AUD_5893
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.964
AUD_6467
60S ribosomal protein L32.
   
   0.962
AUD_6044
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.961
AUD_8702
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.961
AUD_1160
60S ribosomal protein L25.
   
   0.957
AUD_8643
40S ribosomal protein S19.
   
   0.953
AUD_5923
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.951
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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