STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_4727Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
AUD_3651
DNA repair helicase RAD25.
    
 0.795
AUD_2630
RNA polymerase II transcription factor B subunit 3.
    
  0.790
AUD_2721
DNA polymerase subunit delta-2.
    
 0.628
AUD_4023
Crossover junction endonuclease mus81.
    
 0.627
AUD_6485
DNA polymerase.
   
 0.616
AUD_2867
Survival motor neuron-like protein 1.
    
 0.615
AUD_5432
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.576
AUD_0898
Isoform 2 of receptor-interacting serine/threonine-protein kinase 4.
    
  0.574
AUD_6618
Isoform 2 of ankyrin repeat domain-containing protein 50.
    
  0.574
AUD_9320
Isoform 2 of receptor-interacting serine/threonine-protein kinase 4.
    
  0.574
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.