STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_4444Probable aconitate hydratase 2. (227 aa)    
Predicted Functional Partners:
AUD_6739
37S ribosomal protein S26, mitochondrial.
   
 
 0.961
AUD_6755
37S ribosomal protein S8, mitochondrial.
   
 
 0.955
AUD_7876
50S ribosomal protein L15.
   
 
 0.952
AUD_1230
54S ribosomal protein L7, mitochondrial.
   
 
 0.951
AUD_4249
54S ribosomal protein L28, mitochondrial.
   
 
 0.948
AUD_2757
50S ribosomal protein L34.
   
 
 0.947
AUD_3714
54S ribosomal protein L2, mitochondrial.
  
 
 0.946
AUD_5926
54S ribosomal protein L23, mitochondrial.
   
 
 0.946
AUD_2621
54S ribosomal protein L25, mitochondrial.
   
  0.944
AUD_8529
37S ribosomal protein MRP4, mitochondrial.
   
 
 0.944
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.