STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_5459Protein transport protein SEC7. (2005 aa)    
Predicted Functional Partners:
AUD_5964
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.936
AUD_1756
Uncharacterized protein C211.03.
   
 
0.935
AUD_3803
Uncharacterized protein.
    
 0.713
AUD_7853
Uncharacterized protein.
    
 0.713
AUD_7854
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.713
AUD_4088
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.697
AUD_4658
PH and SEC7 domain-containing protein C11E3.11c.
     
0.682
AUD_1194
Uncharacterized protein.
    
   0.599
AUD_5770
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.599
AUD_1015
Uncharacterized protein.
    
 0.598
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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