STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_8071U4/U6.U5 small nuclear ribonucleoprotein component snu23. (217 aa)    
Predicted Functional Partners:
AUD_1072
Pre-mRNA-splicing factor brr2.
   
 0.998
AUD_1840
Microfibrillar-associated protein 1.
   
 0.998
AUD_2474
U4/U6.U5 tri-snRNP-associated protein snu66.
    
 0.998
AUD_1491
Pre-mRNA-splicing factor 38A.
   
 0.995
AUD_9959
Pre-mRNA-splicing factor prp1.
   
 0.995
AUD_2356
Pre-mRNA-splicing factor sap62.
   
 0.994
AUD_2487
Small nuclear ribonucleoprotein Sm D3.
   
  0.994
AUD_7716
Pre-mRNA-processing factor 31.
   
 0.994
AUD_8094
U6 snRNA-associated Sm-like protein LSm7.
   
 0.994
AUD_1141
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.993
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.