Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AUD_1085 | AUD_1843 | A0A0K8L1H4 | A0A0K8L4I6 | U4/U6 small nuclear ribonucleoprotein Prp4. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
AUD_1085 | AUD_1948 | A0A0K8L1H4 | A0A0K8L4V7 | U4/U6 small nuclear ribonucleoprotein Prp4. | Uncharacterized protein. | 0.994 |
AUD_1085 | AUD_2487 | A0A0K8L1H4 | A0A0K8L626 | U4/U6 small nuclear ribonucleoprotein Prp4. | Small nuclear ribonucleoprotein Sm D3. | 0.994 |
AUD_1085 | AUD_6359 | A0A0K8L1H4 | A0A0K8LID8 | U4/U6 small nuclear ribonucleoprotein Prp4. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.994 |
AUD_1085 | AUD_8094 | A0A0K8L1H4 | A0A0K8LND0 | U4/U6 small nuclear ribonucleoprotein Prp4. | U6 snRNA-associated Sm-like protein LSm7. | 0.997 |
AUD_1085 | AUD_9587 | A0A0K8L1H4 | A0A0K8LR06 | U4/U6 small nuclear ribonucleoprotein Prp4. | Uncharacterized RNA-binding protein C1861.04c. | 0.979 |
AUD_1085 | LSM4 | A0A0K8L1H4 | A0A0K8LFK9 | U4/U6 small nuclear ribonucleoprotein Prp4. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.994 |
AUD_1085 | LSM5 | A0A0K8L1H4 | A0A0K8LFE7 | U4/U6 small nuclear ribonucleoprotein Prp4. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.994 |
AUD_1085 | LSM8 | A0A0K8L1H4 | A0A0K8LLQ3 | U4/U6 small nuclear ribonucleoprotein Prp4. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.997 |
AUD_1654 | AUD_6359 | A0A0K8L4P3 | A0A0K8LID8 | DNA topoisomerase 2-associated protein pat1. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
AUD_1654 | AUD_8094 | A0A0K8L4P3 | A0A0K8LND0 | DNA topoisomerase 2-associated protein pat1. | U6 snRNA-associated Sm-like protein LSm7. | 0.999 |
AUD_1654 | LSM4 | A0A0K8L4P3 | A0A0K8LFK9 | DNA topoisomerase 2-associated protein pat1. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
AUD_1654 | LSM5 | A0A0K8L4P3 | A0A0K8LFE7 | DNA topoisomerase 2-associated protein pat1. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
AUD_1654 | LSM8 | A0A0K8L4P3 | A0A0K8LLQ3 | DNA topoisomerase 2-associated protein pat1. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.520 |
AUD_1843 | AUD_1085 | A0A0K8L4I6 | A0A0K8L1H4 | Small nuclear ribonucleoprotein Sm D2. | U4/U6 small nuclear ribonucleoprotein Prp4. | 0.995 |
AUD_1843 | AUD_1948 | A0A0K8L4I6 | A0A0K8L4V7 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.999 |
AUD_1843 | AUD_2487 | A0A0K8L4I6 | A0A0K8L626 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein Sm D3. | 0.999 |
AUD_1843 | AUD_6359 | A0A0K8L4I6 | A0A0K8LID8 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
AUD_1843 | AUD_8094 | A0A0K8L4I6 | A0A0K8LND0 | Small nuclear ribonucleoprotein Sm D2. | U6 snRNA-associated Sm-like protein LSm7. | 0.999 |
AUD_1843 | AUD_9587 | A0A0K8L4I6 | A0A0K8LR06 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized RNA-binding protein C1861.04c. | 0.660 |
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