STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_8234Uncharacterized protein. (335 aa)    
Predicted Functional Partners:
AUD_2192
Zeaxanthin epoxidase, chloroplastic.
   
  0.592
AUD_0898
Isoform 2 of receptor-interacting serine/threonine-protein kinase 4.
   
 0.589
AUD_2887
Chromatin structure-remodeling complex subunit sfh1.
    
 0.589
AUD_6618
Isoform 2 of ankyrin repeat domain-containing protein 50.
   
 0.589
AUD_9320
Isoform 2 of receptor-interacting serine/threonine-protein kinase 4.
   
 0.589
AUD_1386
Ras modification protein erf4.
    
  0.500
AUD_8208
Putative urea carboxylase.
    
  0.492
AUD_1103
Uncharacterized protein.
    
  0.460
AUD_1197
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.460
AUD_1704
Signaling protein YkoW.
    
  0.457
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.