STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUD_9269Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1418 aa)    
Predicted Functional Partners:
AUD_1757
Pre-mRNA-splicing factor syf1.
   
 0.999
AUD_1897
Pre-mRNA-processing factor 19.
    
 0.999
AUD_7717
Pre-mRNA-splicing factor clf1.
    
 0.999
AUD_1141
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.998
AUD_3631
Pre-mRNA-processing protein 45.
    
  0.998
AUD_6141
Peptidyl-prolyl cis-trans isomerase E.
    
 0.998
AUD_9199
Pre-mRNA-splicing factor slt11.
    
 0.998
AUD_9913
Pre-mRNA-splicing factor cef1.
   
 0.998
AUD_1457
Pre-mRNA-splicing factor isy1.
    
 0.997
AUD_6749
Pre-mRNA-processing factor 17.
   
 0.997
Your Current Organism:
Aspergillus udagawae
NCBI taxonomy Id: 91492
Other names: A. udagawae, CBM FA-0702, CBS 114217, Neosartorya udagawae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.