Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NH26_01570 | NH26_08900 | NH26_01570 | NH26_08900 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| NH26_01570 | NH26_19350 | NH26_01570 | NH26_19350 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.942 |
| NH26_01570 | rpoA | NH26_01570 | NH26_16060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.849 |
| NH26_01570 | rpoA-2 | NH26_01570 | NH26_24510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.849 |
| NH26_01570 | rpoB | NH26_01570 | NH26_13670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.935 |
| NH26_08900 | NH26_01570 | NH26_08900 | NH26_01570 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.500 |
| NH26_08900 | NH26_08905 | NH26_08900 | NH26_08905 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.604 |
| NH26_08900 | NH26_10885 | NH26_08900 | NH26_10885 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.547 |
| NH26_08900 | NH26_11210 | NH26_08900 | NH26_11210 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.457 |
| NH26_08900 | NH26_16430 | NH26_08900 | NH26_16430 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| NH26_08900 | NH26_19350 | NH26_08900 | NH26_19350 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.870 |
| NH26_08900 | NH26_20760 | NH26_08900 | NH26_20760 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.500 |
| NH26_08900 | rpoA | NH26_08900 | NH26_16060 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.855 |
| NH26_08900 | rpoA-2 | NH26_08900 | NH26_24510 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.855 |
| NH26_08900 | rpoB | NH26_08900 | NH26_13670 | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.883 |
| NH26_08905 | NH26_08900 | NH26_08905 | NH26_08900 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
| NH26_08905 | NH26_11210 | NH26_08905 | NH26_11210 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.562 |
| NH26_10885 | NH26_08900 | NH26_10885 | NH26_08900 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
| NH26_10885 | NH26_11210 | NH26_10885 | NH26_11210 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.468 |
| NH26_10885 | NH26_19350 | NH26_10885 | NH26_19350 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.477 |
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