STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI60688.1Polyphosphate kinase 2, PPK2 family. (272 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.857
SEJ68499.1
Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Belongs to the GppA/Ppx family.
 
 
 0.707
SEI58773.1
Uncharacterized radical SAM protein YgiQ.
   
    0.589
SEI73660.1
Outer membrane protein.
   
    0.588
SEJ89125.1
Regulatory protein, Fis family.
   
    0.586
SEI60715.1
Nucleoid-associated protein.
       0.576
SEJ04719.1
Hypothetical protein.
   
    0.556
SEJ61886.1
Hypothetical protein.
   
    0.556
SEJ75250.1
Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
 
      0.522
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
 0.493
Your Current Organism:
Pseudomonas linyingensis
NCBI taxonomy Id: 915471
Other names: CGMCC 1.10701, LMG 25967, LMG:25967, P. linyingensis, Pseudomonas linyingensis He et al. 2015, Pseudomonas sp. LYBRD3-7, strain LYBRD3-7
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.