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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOT2Aspartate aminotransferase, mitochondrial. (393 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase, mitochondrial.
   
 0.997
FH
Fumarate hydratase, mitochondrial.
   
 0.985
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial.
   
 
 0.985
GLUD1
Glutamate dehydrogenase 1, mitochondrial.
   
 0.977
MDH1
Malate dehydrogenase, cytoplasmic.
   
 0.976
ASNS
Asparagine synthetase [glutamine-hydrolyzing].
   
 
 0.975
LDHB
L-lactate dehydrogenase B chain.
   
 0.975
TAT
Tyrosine aminotransferase isoform X1.
   
 0.974
GOT1
Aspartate aminotransferase, cytoplasmic.
  
0.971
LDHA
L-lactate dehydrogenase A chain.
   
 0.968
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.