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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNB4Voltage-dependent L-type calcium channel subunit beta-4 isoform X1. (486 aa)    
Predicted Functional Partners:
PRKACB
CAMP-dependent protein kinase catalytic subunit beta isoform X1.
   
 
 0.906
CAMK2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1.
   
 
 0.903
CACNA1B
Calcium voltage-gated channel subunit alpha1 B.
   
 0.834
CACNA1E
Voltage-dependent R-type calcium channel subunit alpha-1E isoform X1.
   
 0.834
CBX3
Chromobox protein homolog 3 isoform X1.
    
   0.809
CACNG2
Voltage-dependent calcium channel gamma-2 subunit isoform X1.
     
 0.798
CACNA2D1
Voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2.
   
 0.749
ENSPMJP00000003141
annotation not available
   
 0.706
CACNA2D2
Voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1.
   
 0.706
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 0.687
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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