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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRGUKLeucine rich repeats and guanylate kinase domain containing. (454 aa)    
Predicted Functional Partners:
MYCBP
C-Myc-binding protein.
    
 
 0.908
DPY30
Protein dpy-30 homolog.
   
 
 0.874
PPP1CC
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit.
   
 0.865
PPP1CA
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit.
   
 0.865
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
   
 0.865
SPAG17
Sperm-associated antigen 17 isoform X1.
   
 
 0.850
AK9
Adenylate kinase 9.
   
 0.843
CFAP74
Cilia- and flagella-associated protein 74 isoform X1.
    
 
 0.839
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
0.823
POLR3C
DNA-directed RNA polymerase III subunit RPC3 isoform X1.
    
 
 0.812
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.