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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATPAF1ATP synthase mitochondrial F1 complex assembly factor 1. (313 aa)    
Predicted Functional Partners:
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
 
 0.778
ATP5F1B
F-type H+-transporting ATPase subunit beta.
    
 
 0.694
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
    
 
 0.693
CDCA8
Borealin.
    
 
 0.610
ATP5F1C
ATP synthase subunit gamma, mitochondrial isoform X1.
   
  
 0.597
ATP23
Mitochondrial inner membrane protease ATP23 homolog isoform X1.
   
  
 0.496
ATP5PB
ATP synthase F(0) complex subunit B1, mitochondrial.
   
  
 0.482
PTPMT1
Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform X1.
      
 0.457
ATP5F1D
F-type H+-transporting ATPase subunit delta.
   
  
 0.451
ATP6
ATP synthase subunit a.
      
 0.441
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.